Tutorials
- edgeR: A Tutorial for Differential Expression Analysis in RNA-Seq Data
- DESeq2: A Tutorial for Differential Expression Analysis in RNA-Seq Data
- Using featureCounts for Quantification of Gene Expression in RNA-seq Analysis
- fasterq-dump: A Tutorial for Retrieving FASTQ Files from a Public Database
- How to Use fastp: Preprocessing FASTQ Files
- How to Use clusterProfiler
- How to Run FastQC from the Command Line
- How to use Salmon: Ultra-fast RNA-Seq Gene Expression Quantification
- How to Use Bowtie2: Mapping in RNA-Seq Analysis
- How to Use TopHat2: Mapping in RNA-Seq Analysis
- How to Use HISAT2: Mapping in RNA-Seq Analysis