RNA-Seq Data Analysis Software
Recommended for the Following People
✔︎ People do not want to outsource or collaborate with external researchers for RNA-Seq data analysis or visualization.
✔︎ People do not have time to learn RNA-Seq data analysis or visualization.
✔︎ People have tried RNA-Seq data analysis or visualization tools from other companies but found them difficult to use.
Easily Conduct RNA-Seq Data Analysis even for a Beginner
This web-based software enables even beginners to easily conduct RNA-Seq data analysis without the need for a high-performance computer or programming skills.
Overview
Starting with either raw RNA-Seq data (FASTQ files/public data) or expression tables (CSV/TSV files), users can perform gene expression quantification, identification of differentially expressed genes, gene ontology(GO) analysis, pathway analysis, as well as drawing volcano plots, MA plots, and heatmaps.
Functions
Quantification of Gene Expression
This feature quantifies gene expression levels from raw data (FASTQ files/public data).
Identification of Differentially Expressed Genes
This feature lists differentially expressed genes between different conditions.
Heatmap
Visualization of gene expression levels. Clustering is also performed simultaneously to place similar genes near each other.
principal Component Analysis（PCA）
Visualization of similarity between samples using principal component analysis.
Hierarchical Clustering
Visualization of similarity between samples using hierarchical clustering.
MA plot
Plot of mean expression levels on the x-axis and expression changes on the y-axis.
Volcano plot
Plot of expression changes on the x-axis and statistical significance on the y-axis.
Gene Ontology(GO) Analysis / Pathway Analysis
This feature detects Gene Ontology terms and pathways enriched in differentially expressed genes.
Details of Analysis
Explanation of the Analysis Conducted.
Data Sharing
Users can share data just by entering an email address.
Pricing
All features are available for 24 USD per month.
| Our software | Other company's software | Contracted service | |
| Pricing | 7-day free trial Monthly Plan: 24 USD/month Annual Plan: 120 USD/year | About several thousand USD/year | About several hundred USD/analysis |
|---|---|---|---|
| PC Setup | No Need | Required | No Need |
| Parameters | Freely configurable | Freely configurable | specified by provider |
| Delivery | Available immediately | Inquiry to sales required | Several days to weeks |
Frequently Asked Questions
Is there support for how to use the service and for understanding the analysis methods?
If you have any issues, please feel free to contact us.
What file formats can be uploaded?
You can upload FASTQ files (uncompressed/gzip compressed) as raw data, and CSV/TSV files as expression tables.
Can I get a receipt?
We will send the receipt via email.
What is an expression table?
It is a table outputting the number of reads mapped to each gene. When you use our service for gene expression quantification, you will obtain both the raw count and the normalized TPM values.
